SMTL ID : 3uk6.1 (1 other biounit)

Crystal Structure of the Tip48 (Tip49b) hexamer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

homo-hexamer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 18 residues within 4Å: Chain A: A.24, H.25, H.27, G.45, M.46, V.47, Q.78, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.267, L.296, I.300 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:A.24, A:H.25, A:V.47, A:Q.78, A:G.80, A:T.81, A:T.81, A:G.82, A:K.83, A:T.84, A:T.84, A:A.85, A:Y.259, A:Y.259 Salt bridges: A:H.25, A:K.83 ADP.2: 20 residues within 4Å: Chain B: A.24, H.25, H.27, I.28, G.45, M.46, V.47, Q.78, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.267, R.271, L.296, I.300 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:H.25, B:V.47, B:G.80, B:T.81, B:T.81, B:G.82, B:K.83, B:T.84, B:T.84, B:T.84, B:A.85, B:Y.259, B:Y.259 Salt bridges: B:H.25, B:K.83 ADP.3: 18 residues within 4Å: Chain C: A.24, H.25, H.27, G.45, M.46, V.47, Q.78, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.267, L.296, I.300 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:H.25, C:V.47, C:G.80, C:T.81, C:T.81, C:G.82, C:K.83, C:T.84, C:T.84, C:A.85, C:Y.259, C:Y.259 Salt bridges: C:H.25, C:K.83 ADP.4: 19 residues within 4Å: Chain D: A.24, H.25, H.27, G.45, M.46, V.47, Q.78, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.267, R.271, L.296, I.300 15 PLIP interactions: 15 interactions with chain D Hydrogen bonds: D:A.24, D:H.25, D:V.47, D:G.80, D:T.81, D:T.81, D:G.82, D:K.83, D:T.84, D:T.84, D:A.85, D:Y.259, D:Y.259 Salt bridges: D:H.25, D:K.83 ADP.5: 16 residues within 4Å: Chain E: A.24, H.25, H.27, G.45, M.46, V.47, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.267, I.300 15 PLIP interactions: 15 interactions with chain E Hydrogen bonds: E:H.25, E:V.47, E:Q.78, E:G.80, E:T.81, E:T.81, E:G.82, E:K.83, E:T.84, E:T.84, E:A.85, E:Y.259, E:Y.259 Salt bridges: E:H.25, E:K.83 ADP.6: 15 residues within 4Å: Chain F: A.24, H.25, H.27, G.45, M.46, V.47, P.79, G.80, T.81, G.82, K.83, T.84, A.85, Y.259, I.300 14 PLIP interactions: 14 interactions with chain F Hydrogen bonds: F:H.25, F:V.47, F:G.80, F:T.81, F:G.82, F:K.83, F:T.84, F:T.84, F:T.84, F:A.85, F:Y.259, F:Y.259 Salt bridges: F:H.25, F:K.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petukhov, M. et al., Large-Scale Conformational Flexibility Determines the Properties of AAA+ TIP49 ATPases. Structure (2012)

Release Date

2012-07-25

Peptides

RuvB-like 2: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
I

F
J

RuvB-like 2

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