SMTL ID : 3uka.1

CRYSTAL STRUCTURE OF UDP-galactopyranose mutase from Aspergillus fumigatus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

homo-tetramer

Ligands

4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 28 residues within 4Å: Chain A: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.60, G.61, H.62, G.239, V.241, T.267, M.268, T.294, R.326, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Y.418 Hydrogen bonds: A:G.15, A:T.17, A:T.17, A:T.17, A:S.38, A:L.45, A:L.45, A:A.46, A:G.60, A:H.62, A:H.62, A:V.241, A:V.241, A:R.326, A:R.326, A:R.446, A:N.456, A:Q.457, A:S.460 FAD.2: 29 residues within 4Å: Chain B: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.60, G.61, H.62, G.239, K.240, V.241, T.267, M.268, T.294, R.326, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:Y.418 Hydrogen bonds: B:G.15, B:T.17, B:T.17, B:T.17, B:S.38, B:L.45, B:L.45, B:G.60, B:H.62, B:H.62, B:V.241, B:V.241, B:R.326, B:R.326, B:R.446, B:N.456, B:Q.457, B:S.460 Water bridges: B:G.18, B:D.37, B:G.43, B:T.267, B:F.447, B:N.456, B:N.456 FAD.3: 28 residues within 4Å: Chain C: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.60, G.61, H.62, G.239, V.241, T.267, M.268, T.294, R.326, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460 25 PLIP interactions: 25 interactions with chain C Hydrophobic interactions: C:Y.418 Hydrogen bonds: C:G.15, C:T.17, C:T.17, C:T.17, C:S.38, C:L.45, C:L.45, C:G.60, C:H.62, C:H.62, C:V.241, C:V.241, C:R.326, C:R.446, C:N.456, C:Q.457, C:S.460 Water bridges: C:G.18, C:G.18, C:S.38, C:S.38, C:R.446, C:R.446, C:F.447 FAD.4: 27 residues within 4Å: Chain D: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.60, G.61, H.62, G.239, V.241, T.267, M.268, T.294, R.326, E.372, G.417, G.445, R.446, G.455, N.456, Q.457, S.460 22 PLIP interactions: 22 interactions with chain D Hydrogen bonds: D:G.15, D:T.17, D:T.17, D:T.17, D:S.38, D:G.43, D:L.45, D:L.45, D:A.46, D:G.60, D:H.62, D:H.62, D:V.241, D:V.241, D:R.326, D:R.446, D:N.456, D:Q.457, D:Q.457, D:S.460 Water bridges: D:T.267, D:R.446

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Straaten, K.E. et al., Structural Insight into the Unique Substrate Binding Mechanism and Flavin Redox State of UDP-galactopyranose Mutase from Aspergillus fumigatus. J.Biol.Chem. (2012)

Release Date

2012-02-22

Peptides

UDP-galactopyranose mutase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

UDP-galactopyranose mutase

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