- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.2: 30 residues within 4Å:- Chain A: G.13, A.14, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.61, H.62, V.63, G.239, K.240, V.241, T.267, M.268, T.294, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460
- Ligands: CL.4
26 PLIP interactions:26 interactions with chain A- Hydrophobic interactions: A:T.294, A:Y.418
- Hydrogen bonds: A:A.14, A:G.15, A:T.17, A:T.17, A:T.17, A:S.38, A:G.44, A:L.45, A:H.62, A:V.63, A:V.63, A:V.241, A:V.241, A:R.446, A:G.455, A:Q.457, A:S.460
- Water bridges: A:G.18, A:S.38, A:N.39, A:T.267, A:F.447, A:F.447
- pi-Stacking: A:H.62
FAD.6: 30 residues within 4Å:- Chain B: I.12, G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.61, H.62, V.63, G.239, K.240, V.241, T.267, M.268, T.294, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460
- Ligands: CL.7
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:T.294, B:Y.418
- Hydrogen bonds: B:G.15, B:T.17, B:T.17, B:T.17, B:S.38, B:G.44, B:L.45, B:L.45, B:H.62, B:V.63, B:V.63, B:V.241, B:V.241, B:T.267, B:R.446, B:G.455, B:Q.457, B:Q.457, B:S.460
- Water bridges: B:G.18, B:S.38, B:N.39, B:F.447, B:F.447
- pi-Stacking: B:H.62
FAD.9: 28 residues within 4Å:- Chain C: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.61, H.62, V.63, G.239, K.240, V.241, T.267, M.268, T.294, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460
25 PLIP interactions:25 interactions with chain C- Hydrophobic interactions: C:L.45, C:T.294, C:Y.418
- Hydrogen bonds: C:G.15, C:T.17, C:T.17, C:T.17, C:S.38, C:L.45, C:V.63, C:V.63, C:V.241, C:V.241, C:R.446, C:G.455, C:Q.457, C:S.460
- Water bridges: C:G.18, C:S.38, C:N.39, C:G.44, C:G.44, C:F.447
- pi-Stacking: C:H.62
- pi-Cation interactions: C:H.62
FAD.11: 27 residues within 4Å:- Chain D: G.13, G.15, P.16, T.17, D.37, S.38, G.44, L.45, A.46, V.59, G.61, H.62, V.63, G.239, K.240, V.241, M.268, T.294, E.372, G.417, Y.418, G.445, R.446, G.455, N.456, Q.457, S.460
21 PLIP interactions:21 interactions with chain D- Hydrophobic interactions: D:T.294, D:Y.418
- Hydrogen bonds: D:A.14, D:G.15, D:T.17, D:T.17, D:T.17, D:S.38, D:L.45, D:V.63, D:V.63, D:V.241, D:V.241, D:R.446, D:G.455, D:Q.457, D:S.460
- Water bridges: D:R.446, D:F.447
- pi-Stacking: D:H.62
- pi-Cation interactions: D:H.62
- 5 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 1 residues within 4Å:- Chain A: Q.357
Ligand excluded by PLIPCL.4: 2 residues within 4Å:- Chain A: A.269
- Ligands: FAD.2
Ligand excluded by PLIPCL.7: 2 residues within 4Å:- Chain B: A.269
- Ligands: FAD.6
Ligand excluded by PLIPCL.12: 3 residues within 4Å:- Chain D: P.356, Q.357, S.358
Ligand excluded by PLIPCL.13: 1 residues within 4Å:- Chain D: A.269
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- van Straaten, K.E. et al., Structural Insight into the Unique Substrate Binding Mechanism and Flavin Redox State of UDP-galactopyranose Mutase from Aspergillus fumigatus. J.Biol.Chem. (2012)
- Release Date
- 2012-02-22
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
DD
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.63 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 5 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- van Straaten, K.E. et al., Structural Insight into the Unique Substrate Binding Mechanism and Flavin Redox State of UDP-galactopyranose Mutase from Aspergillus fumigatus. J.Biol.Chem. (2012)
- Release Date
- 2012-02-22
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
DD
F