SMTL ID : 3uqa.1

Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation A54E from Burkholderia pseudomallei complexed with FK506

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x FK5: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN(Non-covalent)

FK5.1: 13 residues within 4Å: Chain A: Y.129, F.139, D.140, R.145, F.149, M.157, V.158, I.159, W.162, G.184, Y.185, I.194, F.202 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.129, A:F.149, A:F.149, A:F.149, A:W.162, A:W.162, A:Y.185, A:I.194 Hydrogen bonds: A:D.140, A:I.159, A:Y.185

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: A.121, G.122, Q.123, T.124, V.209 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.121, A:T.124, A:T.124

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: P.42, R.44, A.72, D.73 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Begley, D.W. et al., A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother. (2014)

Release Date

2011-12-07

Peptides

Ubiquitin-like protein SMT3, Peptidyl-prolyl cis-trans isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin-like protein SMT3, Peptidyl-prolyl cis-trans isomerase