- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CO: COBALT (II) ION(Non-covalent)
- 3 x IMD: IMIDAZOLE(Non-covalent)
IMD.3: 8 residues within 4Å:- Chain A: H.196, D.198, D.199, D.219, G.220, W.223, R.246, D.267
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.198
IMD.4: 6 residues within 4Å:- Chain A: W.97, F.98, L.237, F.272, S.274
- Chain B: L.102
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.274
- pi-Stacking: A:W.97
IMD.11: 8 residues within 4Å:- Chain B: H.196, D.198, D.199, D.219, G.220, W.223, R.246, D.267
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.219, B:D.267
- pi-Stacking: B:H.196, B:W.223
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 8 residues within 4Å:- Chain A: A.29, G.30, F.31, L.32, R.33, G.73, R.74, D.75
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.30, A:L.32, A:R.33, A:R.74
- Water bridges: A:F.31, A:F.31
EDO.6: 6 residues within 4Å:- Chain A: G.52, R.55, F.270, P.288, D.289, G.290
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:R.55, A:D.289
- Water bridges: A:K.48, A:G.52, A:W.268, A:D.284, A:G.290, A:A.292
EDO.7: 4 residues within 4Å:- Chain A: R.42, K.43, V.46, E.81
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.42, A:R.42
EDO.8: 5 residues within 4Å:- Chain A: S.77, A.80, R.84, T.127, I.129
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:V.6, A:R.84
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tsai, P.C. et al., Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry (2012)
- Release Date
- 2012-08-01
- Peptides
- Parathion hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CO: COBALT (II) ION(Non-covalent)
- 3 x IMD: IMIDAZOLE(Non-covalent)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tsai, P.C. et al., Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry (2012)
- Release Date
- 2012-08-01
- Peptides
- Parathion hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B