SMTL ID : 3usr.1 (1 other biounit)

Structure of Y194F glycogenin mutant truncated at residue 270

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: D.150, C.151, N.188, T.189, N.192 Chain B: F.224 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.150, A:N.188 GOL.2: 5 residues within 4Å: Chain A: E.139, L.140, F.191, S.193, K.201 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.140, A:L.140, A:S.193, A:K.201 Water bridges: A:S.193, A:S.193, A:S.193 GOL.4: 6 residues within 4Å: Chain A: F.224 Chain B: D.150, C.151, N.188, T.189, N.192 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.150, B:N.188 GOL.5: 5 residues within 4Å: Chain B: E.139, L.140, F.191, S.193, K.201 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:L.140, B:L.140, B:S.193, B:K.201 Water bridges: B:S.193, B:S.193, B:S.193

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: D.198, I.199 Ligands: CL.6 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: D.198, I.199 Ligands: CL.3 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Issoglio, F.M. et al., Mechanisms of monomeric and dimeric glycogenin autoglucosylation. J.Biol.Chem. (2012)

Release Date

2011-12-14

Peptides

Glycogenin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogenin-1

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