- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FDA: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: P.310, E.311, R.312, K.405
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.312
- Water bridges: A:E.311, A:E.311
- Salt bridges: A:R.312, A:K.405
SO4.3: 3 residues within 4Å:- Chain A: P.84, K.85, E.86
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:P.84, A:E.86
SO4.6: 3 residues within 4Å:- Chain B: N.43, D.53, R.416
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:N.43, B:N.43, B:D.53
- Water bridges: B:T.45, B:R.416, B:R.416
- Salt bridges: B:R.416
SO4.7: 4 residues within 4Å:- Chain B: P.310, E.311, R.312, K.405
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.311, B:R.312
- Salt bridges: B:R.312, B:K.405
SO4.10: 5 residues within 4Å:- Chain C: P.310, E.311, R.312, K.405
- Ligands: SO4.13
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:R.312
- Water bridges: C:E.311, C:E.311
- Salt bridges: C:R.312, C:K.405
SO4.11: 4 residues within 4Å:- Chain C: R.94, Y.107, N.206, W.318
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:N.206, C:N.206
- Water bridges: C:S.96
- Salt bridges: C:R.94
SO4.12: 2 residues within 4Å:- Chain C: P.117, K.118
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:K.118
- Water bridges: C:E.119
- Salt bridges: C:K.118
SO4.13: 5 residues within 4Å:- Chain C: P.310, R.312, K.405, D.408
- Ligands: SO4.10
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:D.408
- Salt bridges: C:R.312, C:K.405
SO4.15: 4 residues within 4Å:- Chain D: P.310, E.311, R.312, K.405
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:R.312
- Water bridges: D:E.311, D:E.311
- Salt bridges: D:R.312, D:K.405
SO4.16: 2 residues within 4Å:- Chain D: R.309, D.315
1 PLIP interactions:1 interactions with chain D- Salt bridges: D:R.309
SO4.17: 4 residues within 4Å:- Chain D: R.94, Y.107, N.206, W.318
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:N.206
- Water bridges: D:R.94, D:S.96, D:S.96, D:N.206
- Salt bridges: D:R.94
SO4.18: 2 residues within 4Å:- Chain D: P.117, K.118
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:K.118
- Water bridges: D:E.119
- Salt bridges: D:K.118
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
GDU.4: 24 residues within 4Å:- Chain A: G.65, V.67, F.69, V.98, Y.107, P.108, F.109, Q.110, F.145, F.161, M.162, Y.165, N.166, W.170, R.185, V.186, N.210, W.318, Y.320, R.330, Y.422, Y.456, N.460
- Ligands: FDA.1
25 PLIP interactions:25 interactions with chain A- Hydrophobic interactions: A:Y.107, A:F.161
- Hydrogen bonds: A:F.109, A:Q.110, A:Q.110, A:N.166, A:N.166, A:R.185, A:N.210, A:Y.320, A:Y.320, A:Y.456, A:Y.456, A:N.460, A:N.460
- Water bridges: A:A.187, A:T.332, A:T.332, A:R.450, A:R.450, A:N.460
- Salt bridges: A:R.330, A:R.330, A:R.330
- pi-Stacking: A:Y.320
GDU.8: 23 residues within 4Å:- Chain B: G.65, F.69, V.98, Y.107, P.108, F.109, Q.110, F.145, F.161, M.162, Y.165, N.166, W.170, R.185, V.186, N.210, W.318, Y.320, R.330, Y.422, Y.456, N.460
- Ligands: FDA.5
26 PLIP interactions:26 interactions with chain B- Hydrophobic interactions: B:Y.107, B:F.161
- Hydrogen bonds: B:F.109, B:Q.110, B:Q.110, B:N.166, B:N.166, B:R.185, B:N.210, B:Y.320, B:Y.422, B:Y.456, B:N.460, B:N.460
- Water bridges: B:Y.107, B:A.187, B:Y.320, B:Y.320, B:R.450, B:R.450, B:N.460
- Salt bridges: B:R.185, B:R.330, B:R.330, B:R.330
- pi-Stacking: B:Y.320
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dhatwalia, R. et al., Crystal Structures and Small-angle X-ray Scattering Analysis of UDP-galactopyranose Mutase from the Pathogenic Fungus Aspergillus fumigatus. J.Biol.Chem. (2012)
- Release Date
- 2012-02-08
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.25 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FDA: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dhatwalia, R. et al., Crystal Structures and Small-angle X-ray Scattering Analysis of UDP-galactopyranose Mutase from the Pathogenic Fungus Aspergillus fumigatus. J.Biol.Chem. (2012)
- Release Date
- 2012-02-08
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D