- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-pentamer
- Ligands
- 15 x PLC: DIUNDECYL PHOSPHATIDYL CHOLINE(Non-covalent)(Non-functional Binders)
- 6 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)(Non-functional Binders)
LMT.5: 7 residues within 4Å:- Chain A: I.237, A.241, I.244, T.248
- Chain E: A.241
- Ligands: LMT.11, LMT.12
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain E- Hydrophobic interactions: A:I.237, A:A.241, A:I.244, A:T.248, E:A.241
LMT.11: 4 residues within 4Å:- Chain A: A.241
- Chain B: A.241
- Ligands: LMT.5, LMT.12
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.241
LMT.12: 4 residues within 4Å:- Ligands: LMT.5, LMT.11, LMT.16, LMT.26
No protein-ligand interaction detected (PLIP)LMT.16: 6 residues within 4Å:- Chain B: A.241
- Chain C: I.240, A.241, I.244, T.248
- Ligands: LMT.12
6 PLIP interactions:5 interactions with chain C, 1 interactions with chain B- Hydrophobic interactions: C:I.240, C:A.241, C:I.244, C:I.244, C:T.248, B:A.241
LMT.21: 5 residues within 4Å:- Chain C: A.241
- Chain D: A.241, I.244, L.245, T.248
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:I.244, C:A.241
LMT.26: 5 residues within 4Å:- Chain D: A.241
- Chain E: A.241, I.244, T.248
- Ligands: LMT.12
3 PLIP interactions:1 interactions with chain D, 2 interactions with chain E- Hydrophobic interactions: D:A.241, E:I.244, E:T.248
- 1 x NA: SODIUM ION(Non-functional Binders)
- 5 x CL: CHLORIDE ION(Non-functional Binders)
CL.7: 3 residues within 4Å:- Chain A: R.81, F.82, R.89
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain B: R.81, F.82, R.89
Ligand excluded by PLIPCL.17: 3 residues within 4Å:- Chain C: R.81, F.82, R.89
Ligand excluded by PLIPCL.22: 3 residues within 4Å:- Chain D: F.82, V.85, R.89
Ligand excluded by PLIPCL.27: 2 residues within 4Å:- Chain E: F.82, V.85
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Prevost, M.S. et al., A locally closed conformation of a bacterial pentameric proton-gated ion channel. Nat.Struct.Mol.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Glr4197 protein: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-pentamer
- Ligands
- 15 x PLC: DIUNDECYL PHOSPHATIDYL CHOLINE(Non-covalent)(Non-functional Binders)
- 6 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)(Non-functional Binders)
- 1 x NA: SODIUM ION(Non-functional Binders)
- 5 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Prevost, M.S. et al., A locally closed conformation of a bacterial pentameric proton-gated ion channel. Nat.Struct.Mol.Biol. (2012)
- Release Date
- 2012-05-16
- Peptides
- Glr4197 protein: ABCDE
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
E - Membrane
-
We predict this structure to be a membrane protein.