SMTL ID : 3uvk.1

Crystal structure of WDR5 in complex with the WDR5-interacting motif of MLL2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.1: 12 residues within 4Å: Chain A: P.39, W.79, S.80, S.81, N.120, F.121, N.122, P.123, S.125, H.162, F.163 Ligands: SO4.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.122, A:S.125 Water bridges: A:W.79, A:N.120, A:F.121, A:H.162, A:N.164, A:P.208

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.162, K.205 Ligands: BTB.1 7 PLIP interactions: 7 interactions with chain A Water bridges: A:K.36, A:N.120, A:N.120, A:K.205, A:K.205 Salt bridges: A:H.162, A:K.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, P. et al., The plasticity of WDR5 peptide-binding cleft enables the binding of the SET1 family of histone methyltransferases. Nucleic Acids Res. (2012)

Release Date

2011-12-14

Peptides

WD repeat-containing protein 5: A
Histone-lysine N-methyltransferase MLL2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

WD repeat-containing protein 5

Histone-lysine N-methyltransferase MLL2

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