SMTL ID : 3uvp.1

Human p38 MAP Kinase in Complex with a Benzamide Substituted Benzosuberone

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x 048: N-{2-fluoro-5-[(5-oxo-6,7,8,9-tetrahydro-5H-benzo[7]annulen-2-yl)amino]phenyl}benzamide(Non-covalent)

048.1: 17 residues within 4Å: Chain A: A.51, K.53, E.71, L.74, L.75, I.84, L.104, T.106, H.107, L.108, M.109, G.110, A.111, A.157, L.167, D.168, F.169 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.51, A:K.53, A:E.71, A:L.74, A:T.106, A:L.108 Hydrogen bonds: A:K.53, A:E.71, A:M.109, A:G.110, A:D.168, A:D.168 pi-Stacking: A:F.169

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.2: 13 residues within 4Å: Chain A: E.192, L.195, W.197, H.199, Y.200, N.201, L.236, L.246, K.249, L.291, D.292, S.293, D.294 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.195, A:L.236, A:L.246 Hydrogen bonds: A:H.199, A:K.249, A:D.292, A:S.293, A:S.293 Water bridges: A:N.201 BOG.3: 13 residues within 4Å: Chain A: L.195, N.196, W.197, M.198, H.199, I.229, L.232, K.249, I.250, S.251, A.255, Y.258, I.259 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.195, A:I.229, A:L.232, A:Y.258, A:Y.258, A:I.259 Hydrogen bonds: A:L.195, A:K.249, A:S.251 Water bridges: A:S.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martz, K.E. et al., Targeting the Hinge Glycine Flip and the Activation Loop: Novel Approach to Potent p38 alpha Inhibitors. J.Med.Chem. (2012)

Release Date

2012-11-07

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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