SMTL ID : 3uvq.1

Human p38 MAP Kinase in Complex with a Dibenzosuberone Derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x FS8: N-{5-[(7-{[(2R)-2,3-dihydroxypropyl]oxy}-5-oxo-10,11-dihydro-5H-dibenzo[a,d][7]annulen-2-yl)amino]-2-fluorophenyl}benzamide(Non-covalent)

FS8.1: 17 residues within 4Å: Chain A: R.49, A.51, K.53, E.71, L.74, L.75, I.84, L.104, T.106, L.108, M.109, G.110, A.111, D.112, L.167, D.168, F.169 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:A.51, A:K.53, A:E.71, A:L.74, A:L.74, A:L.75, A:I.84, A:T.106, A:L.108, A:D.112, A:L.167 Hydrogen bonds: A:R.49, A:K.53, A:E.71, A:M.109, A:G.110, A:D.168, A:D.168 pi-Stacking: A:F.169

1 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.2: 14 residues within 4Å: Chain A: P.191, E.192, L.195, W.197, H.199, Y.200, L.232, L.246, K.249, I.259, L.291, D.292, S.293, D.294 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.191, A:W.197, A:L.232, A:L.246, A:I.259, A:L.291 Hydrogen bonds: A:H.199, A:D.292, A:S.293 Water bridges: A:E.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fischer, S. et al., Dibenzosuberones as p38 mitogen-activated protein kinase inhibitors with low ATP competitiveness and outstanding whole blood activity. J.Med.Chem. (2013)

Release Date

2012-12-05

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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