SMTL ID : 3uwn.1

The 3-MBT repeat domain of L3MBTL1 in complex with a methyl-lysine mimic

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x UWN: [2-(phenylamino)benzene-1,4-diyl]bis{[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone}(Non-covalent)

UWN.1: 7 residues within 4Å: Chain A: D.156, N.159, L.162, C.164, F.180, W.183, Y.187 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:N.159, A:L.162, A:F.180, A:W.183, A:Y.187 Hydrogen bonds: A:N.159 Salt bridges: A:D.156 pi-Cation interactions: A:W.183, A:W.183

14 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 6 residues within 4Å: Chain A: T.20, A.21, K.255, L.256, P.304, A.305 No protein-ligand interaction detected (PLIP) UNX.3: 2 residues within 4Å: Chain A: H.72, G.75 No protein-ligand interaction detected (PLIP) UNX.4: 2 residues within 4Å: Chain A: P.93, W.96 No protein-ligand interaction detected (PLIP) UNX.5: 4 residues within 4Å: Chain A: R.261, I.295, D.296, H.299 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: P.53, Y.189, W.190 No protein-ligand interaction detected (PLIP) UNX.7: 2 residues within 4Å: Chain A: H.179, N.182 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain A: W.183, D.184, Q.215 No protein-ligand interaction detected (PLIP) UNX.9: 3 residues within 4Å: Chain A: P.200, W.203, K.206 No protein-ligand interaction detected (PLIP) UNX.10: 3 residues within 4Å: Chain A: H.283, D.285, G.286 No protein-ligand interaction detected (PLIP) UNX.11: 2 residues within 4Å: Chain A: S.249, L.251 No protein-ligand interaction detected (PLIP) UNX.12: 2 residues within 4Å: Chain A: E.63, V.64 No protein-ligand interaction detected (PLIP) UNX.13: 4 residues within 4Å: Chain A: R.262, W.287, Y.291, S.325 No protein-ligand interaction detected (PLIP) UNX.14: 1 residues within 4Å: Chain A: P.300 No protein-ligand interaction detected (PLIP) UNX.15: 3 residues within 4Å: Chain A: R.157, D.298, H.299 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhong, N. et al., The 3-MBT repeat domain of L3MBTL1 in complex with a methyl-lysine mimic. To be Published

Release Date

2012-03-07

Peptides

Lethal(3)malignant brain tumor-like protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lethal(3)malignant brain tumor-like protein 1

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