SMTL ID : 3uyk.1

Spinosyn Rhamnosyltransferase SpnG complexed with spinosyn aglycone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x 0CX: (2R,3aS,5aR,5bS,9S,13S,14R,16aS,16bR)-9-ethyl-2,13-dihydroxy-14-methyl-2,3,3a,5a,5b,6,9,10,11,12,13,14,16a,16b-tetradecahydro-1H-as-indaceno[3,2-d]oxacyclododecine-7,15-dione(Non-covalent)

0CX.2: 10 residues within 4Å: Chain B: L.9, P.10, Y.11, H.14, T.91, N.94, V.95, C.123, M.228, F.316 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.9, B:L.9, B:P.10, B:Y.11, B:T.91, B:N.94, B:V.95, B:F.316, B:F.316, B:F.316 Hydrogen bonds: B:N.94

1 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.3: 7 residues within 4Å: Chain B: G.77, Q.78, R.79, D.80, S.189, D.320, R.323 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:R.79, B:D.80, B:D.80, B:S.189, B:D.320 Water bridges: B:R.79, B:S.189, B:S.189, B:R.323 Salt bridges: B:R.79, B:R.323

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Isiorho, E.A. et al., Structural Studies of the Spinosyn Rhamnosyltransferase, SpnG. Biochemistry (2012)

Release Date

2012-02-15

Peptides

NDP-rhamnosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NDP-rhamnosyltransferase

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