SMTL ID : 3v08.1

Crystal structure of Equine Serum Albumin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

11 x BR: BROMIDE ION(Non-covalent)

BR.1: 5 residues within 4Å: Chain A: H.145, P.146, Y.147, F.148, S.192 Ligand excluded by PLIP BR.2: 3 residues within 4Å: Chain A: R.256, L.282, S.286 Ligand excluded by PLIP BR.3: 3 residues within 4Å: Chain A: V.417, S.418, T.421 Ligand excluded by PLIP BR.4: 2 residues within 4Å: Chain A: H.266, S.269 Ligand excluded by PLIP BR.5: 4 residues within 4Å: Chain A: A.414, P.415, Q.416, S.469 Ligand excluded by PLIP BR.6: 4 residues within 4Å: Chain A: H.509, A.510, E.564, F.567 Ligand excluded by PLIP BR.12: 5 residues within 4Å: Chain A: L.66, D.248, L.249, L.250, E.251 Ligand excluded by PLIP BR.14: 2 residues within 4Å: Chain A: V.46, F.49 Ligand excluded by PLIP BR.28: 4 residues within 4Å: Chain A: A.193, T.428, L.454, A.455 Ligand excluded by PLIP BR.29: 2 residues within 4Å: Chain A: L.386, S.488 Ligand excluded by PLIP BR.31: 3 residues within 4Å: Chain A: N.549, S.577, S.578 Ligand excluded by PLIP

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 3 residues within 4Å: Chain A: P.516, E.517, D.518 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.517, A:D.518 SO4.8: 4 residues within 4Å: Chain A: H.3, H.9, R.10, D.255 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.251 Salt bridges: A:H.9, A:R.10 SO4.9: 4 residues within 4Å: Chain A: H.3, H.9, N.12, D.13 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.12, A:D.13 Salt bridges: A:H.3, A:H.9 SO4.10: 1 residues within 4Å: Chain A: R.409 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.409 SO4.11: 4 residues within 4Å: Chain A: F.508, H.509, D.511, I.512 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.509, A:D.511, A:I.512 SO4.13: 4 residues within 4Å: Chain A: K.412, T.539, K.540, E.541 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.540 Salt bridges: A:K.412

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.15: 6 residues within 4Å: Chain A: W.213, S.214, R.217, L.218, L.237 Ligands: UNX.19 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.214

12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.16: 8 residues within 4Å: Chain A: L.218, F.222, I.263, I.289 Ligands: UNX.17, UNX.18, UNX.19, UNX.20 No protein-ligand interaction detected (PLIP) UNX.17: 8 residues within 4Å: Chain A: I.263, I.289 Ligands: UNX.16, UNX.18, UNX.19, UNX.20, UNX.21, UNX.23 No protein-ligand interaction detected (PLIP) UNX.18: 10 residues within 4Å: Chain A: I.289 Ligands: UNX.16, UNX.17, UNX.19, UNX.20, UNX.21, UNX.22, UNX.23, UNX.24, UNX.25 No protein-ligand interaction detected (PLIP) UNX.19: 11 residues within 4Å: Chain A: L.237 Ligands: EDO.15, UNX.16, UNX.17, UNX.18, UNX.20, UNX.21, UNX.23, UNX.24, UNX.25, UNX.26 No protein-ligand interaction detected (PLIP) UNX.20: 10 residues within 4Å: Chain A: I.289 Ligands: UNX.16, UNX.17, UNX.18, UNX.19, UNX.21, UNX.22, UNX.23, UNX.24, UNX.25 No protein-ligand interaction detected (PLIP) UNX.21: 8 residues within 4Å: Chain A: I.289 Ligands: UNX.17, UNX.18, UNX.19, UNX.20, UNX.22, UNX.23, UNX.24 No protein-ligand interaction detected (PLIP) UNX.22: 7 residues within 4Å: Chain A: R.256, L.259 Ligands: UNX.18, UNX.20, UNX.21, UNX.23, UNX.24 No protein-ligand interaction detected (PLIP) UNX.23: 11 residues within 4Å: Chain A: Y.149, L.237 Ligands: UNX.17, UNX.18, UNX.19, UNX.20, UNX.21, UNX.22, UNX.24, UNX.25, UNX.26 No protein-ligand interaction detected (PLIP) UNX.24: 11 residues within 4Å: Chain A: Y.149, L.237, R.256 Ligands: UNX.18, UNX.19, UNX.20, UNX.21, UNX.22, UNX.23, UNX.25, UNX.26 No protein-ligand interaction detected (PLIP) UNX.25: 10 residues within 4Å: Chain A: Y.149, H.241, R.256, A.290 Ligands: UNX.18, UNX.19, UNX.20, UNX.23, UNX.24, UNX.26 No protein-ligand interaction detected (PLIP) UNX.26: 7 residues within 4Å: Chain A: Y.149, L.237, H.241 Ligands: UNX.19, UNX.23, UNX.24, UNX.25 No protein-ligand interaction detected (PLIP) UNX.27: 4 residues within 4Å: Chain A: S.341, R.347, E.449, R.484 No protein-ligand interaction detected (PLIP)

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.30: 3 residues within 4Å: Chain A: D.511, T.514, L.515 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.515 Hydrogen bonds: A:T.514

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Majorek, K.A. et al., Structural and immunologic characterization of bovine, horse, and rabbit serum albumins. Mol.Immunol. (2012)

Release Date

2012-01-11

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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