SMTL ID : 3v2y.1

Crystal Structure of a Lipid G protein-Coupled Receptor at 2.80A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x ML5: {(3R)-3-amino-4-[(3-hexylphenyl)amino]-4-oxobutyl}phosphonic acid(Non-covalent)

ML5.1: 15 residues within 4Å: Chain A: Y.47, K.52, N.119, S.123, R.138, E.139, M.142, F.143, L.146, V.212, C.224, W.434, L.441, E.459, L.462 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:M.142, A:F.143, A:F.143, A:F.143, A:W.434, A:L.441, A:L.462, A:L.462 Hydrogen bonds: A:Y.47, A:Y.47, A:K.52, A:N.119, A:N.119, A:S.123, A:R.138, A:E.139

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.48, L.53 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hanson, M.A. et al., Crystal structure of a lipid G protein-coupled receptor. Science (2012)

Release Date

2012-02-15

Peptides

Sphingosine 1-phosphate receptor 1, Lysozyme chimera (E.C.3.2.1.17): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sphingosine 1-phosphate receptor 1, Lysozyme chimera (E.C.3.2.1.17)

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