SMTL ID : 3v3l.1 (1 other biounit)

Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x V3L: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate)(Non-covalent)

V3L.1: 14 residues within 4Å: Chain A: Y.9, G.11, R.12, W.16, Y.18, I.41, Y.46, Q.55, G.62, R.63, R.65, K.77, A.80, G.81 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:Y.9, A:R.12, A:Q.55, A:Q.55, A:R.63, A:R.63 Water bridges: A:R.12, A:N.13, A:G.62, A:R.63, A:R.65, A:R.65, A:R.65, A:R.65, A:K.77, A:A.80 Salt bridges: A:R.12, A:R.65, A:R.65, A:K.77 pi-Stacking: A:Y.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Z. et al., Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination. Genes Dev. (2012)

Release Date

2012-02-15

Peptides

E3 ubiquitin-protein ligase RNF146: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase RNF146

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