SMTL ID : 3v44.1

Crystal structure of the N-terminal fragment of zebrafish TLR5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.83 Å

Oligo State

monomer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: E.44, N.46, T.48 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.48 Hydrogen bonds: A:E.44, A:N.46 NAG.2: 3 residues within 4Å: Chain A: N.72, E.95, T.96 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.72 NAG.3: 4 residues within 4Å: Chain A: G.179, K.180, N.211, S.213 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoon, S.I. et al., Structural basis of TLR5-flagellin recognition and signaling. Science (2012)

Release Date

2012-02-29

Peptides

Toll-like receptor 5b and variable lymphocyte receptor B.61 chimeric protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Toll-like receptor 5b and variable lymphocyte receptor B.61 chimeric protein