SMTL ID : 3v4o.1

Human MALT1 (caspase domain) in complex with an irreversible peptidic inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x PHQ- VAL- ARG- PRO- ARG- CF0: MALT1 Inhibitor(Non-covalent)

PHQ-VAL-ARG-PRO-ARG-CF0.1: 20 residues within 4Å: Chain A: K.34, L.35, A.37, P.38, D.41, A.89, G.90, H.91, G.92, D.138, M.139, C.140, E.173, A.174, F.175, E.176, I.177, Q.178, H.179, L.217 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:L.35, A:F.175, A:F.175, A:I.177, A:Q.178, A:L.217 Hydrogen bonds: A:K.34, A:A.37, A:H.91, A:G.92, A:D.138, A:C.140, A:A.174, A:E.176, A:E.176, A:Q.178, A:Q.178, A:Q.178 Water bridges: A:E.176 Salt bridges: A:D.41, A:D.138, A:E.176 PHQ-VAL-ARG-PRO-ARG-CF0.2: 20 residues within 4Å: Chain B: K.34, L.35, A.37, P.38, D.41, A.89, G.90, H.91, G.92, D.138, M.139, C.140, E.173, A.174, F.175, E.176, I.177, Q.178, H.179, L.217 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:L.35, B:F.175, B:F.175, B:I.177, B:Q.178, B:L.217 Hydrogen bonds: B:K.34, B:A.37, B:G.92, B:D.138, B:C.140, B:A.174, B:E.176, B:E.176, B:Q.178, B:Q.178, B:Q.178 Water bridges: B:Y.87 Salt bridges: B:D.41, B:D.138, B:E.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wiesmann, C. et al., Structural Determinants of MALT1 Protease Activity. J.Mol.Biol. (2012)

Release Date

2012-03-14

Peptides

Mucosa-associated lymphoid tissue lymphoma translocation protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Mucosa-associated lymphoid tissue lymphoma translocation protein 1