SMTL ID : 3v5q.1 (1 other biounit)

Discovery of a selective TRK Inhibitor with efficacy in rodent cancer tumor models

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: R.14, I.17, V.18, L.19 Ligand excluded by PLIP

1 x 0F4: 1-(3-{[(3Z)-2-oxo-3-(1H-pyrrol-2-ylmethylidene)-2,3-dihydro-1H-indol-6-yl]amino}phenyl)-3-[3-(trifluoromethyl)phenyl]urea(Non-covalent)

0F4.2: 22 residues within 4Å: Chain A: L.23, A.49, K.51, E.67, L.70, L.71, L.74, I.79, F.96, E.97, Y.98, M.99, K.100, G.102, L.149, F.154, H.156, L.165, I.174, G.175, D.176, F.177 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.23, A:A.49, A:K.51, A:L.70, A:L.74, A:F.96, A:F.96, A:F.154, A:L.165, A:D.176, A:F.177 Hydrogen bonds: A:E.67, A:E.67, A:E.67, A:E.97, A:M.99, A:M.99, A:G.102, A:D.176 pi-Stacking: A:F.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Albaugh, P. et al., Discovery of GNF-5837, a Selective TRK Inhibitor with Efficacy in Rodent Cancer Tumor Models. ACS Med Chem Lett (2012)

Release Date

2012-02-08

Peptides

NT-3 growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NT-3 growth factor receptor

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