SMTL ID : 3v6e.1

Crystal Structure of USP2 and a mutant form of Ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.187, C.190, C.238, C.241 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.187, A:C.190, A:C.238, A:C.241

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: T.216, L.217, M.218, N.282, P.284 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: R.111 Chain B: K.44, E.68, D.69 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: R.125, L.128, D.129, H.132, W.201 Chain B: G.64, K.65 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.125, A:D.129, B:G.64 Water bridges: A:Y.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ernst, A. et al., A strategy for modulation of enzymes in the ubiquitin system. Science (2013)

Release Date

2012-12-19

Peptides

Ubiquitin carboxyl-terminal hydrolase 2: A
Ubiquitin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin carboxyl-terminal hydrolase 2

Ubiquitin

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