SMTL ID : 3v6k.2 (1 other biounit)

Replication of N2,3-Ethenoguanine by DNA Polymerases

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.12, D.110, E.111 Chain B: T.10 Ligands: MG.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.12 MG.3: 4 residues within 4Å: Chain A: D.12, F.13, D.110 Ligands: MG.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.12, A:F.13, A:D.110, H2O.1

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: A.186, V.188, I.191 Chain B: C.9 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:A.186, A:I.191 CA.4: 3 residues within 4Å: Chain A: D.299 Chain B: G.5, A.6 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.299, A:D.299 CA.5: 2 residues within 4Å: Chain A: E.99, Y.100 No protein-ligand interaction detected (PLIP) CA.6: 2 residues within 4Å: Chain A: S.108, I.109 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, L. et al., Replication of n(2) ,3-ethenoguanine by DNA polymerases. Angew.Chem.Int.Ed.Engl. (2012)

Release Date

2012-04-25

Peptides

DNA polymerase IV: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

DNA polymerase IV

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