SMTL ID : 3v7n.1

Crystal structure of Threonine synthase (thrC) from from Burkholderia thailandensis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x MLA: MALONIC ACID(Non-covalent)

MLA.1: 7 residues within 4Å: Chain A: K.130, T.158, S.159, G.160, D.161, T.162 Ligands: BO3.4 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.159, A:G.160, A:D.161, A:T.162, A:T.162 Water bridges: A:K.130, A:K.130, A:D.161, A:T.162 Salt bridges: A:K.130, A:K.130

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: A.74, A.75, R.78 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.78 EDO.3: 3 residues within 4Å: Chain A: R.177, P.201, N.202 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.177, A:P.201 EDO.5: 8 residues within 4Å: Chain A: L.37, P.38, S.39, E.40, Y.41, F.343, D.344, R.348 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.39, A:R.348 EDO.6: 4 residues within 4Å: Chain A: T.151, E.174, G.175, V.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.151, A:G.175 Water bridges: A:V.176, A:V.176 EDO.7: 3 residues within 4Å: Chain A: R.286, M.287, G.289 No protein-ligand interaction detected (PLIP)

2 x BO3: BORIC ACID(Non-covalent)

BO3.4: 6 residues within 4Å: Chain A: K.130, T.162, N.238, S.239, R.244 Ligands: MLA.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.130, A:K.130, A:K.130, A:S.239, A:R.244, A:R.244 BO3.8: 3 residues within 4Å: Chain A: T.54, L.55, K.254 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.254 Water bridges: A:L.55, A:D.101, A:K.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One (2013)

Release Date

2012-01-11

Peptides

Threonine synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Threonine synthase