SMTL ID : 3v8h.1 (1 other biounit)

Crystal structure of Thymidylate Synthase from Burkholderia thailandensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 9 residues within 4Å: Chain A: L.193, C.196, R.218, S.219, D.221, H.259, Y.261 Chain B: R.176, R.177 9 PLIP interactions: 6 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:R.218, A:S.219, A:S.219, B:R.176 Water bridges: A:D.221 Salt bridges: A:R.218, A:H.259, B:R.176, B:R.177

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: A.69, R.71, D.108, V.112, R.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.71, A:D.108 EDO.3: 4 residues within 4Å: Chain A: A.78, L.79, E.306, P.307 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.79 Water bridges: A:R.68, A:E.306 EDO.4: 5 residues within 4Å: Chain A: V.122, E.147 Chain B: Y.120, V.142, H.156 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.120 EDO.5: 6 residues within 4Å: Chain A: W.183 Chain B: Q.161, D.164, C.165, R.177, L.179 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One (2013)

Release Date

2012-01-25

Peptides

Thymidylate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Thymidylate synthase

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