SMTL ID : 3v8y.1 (1 other biounit)

Structure of apo-glycogenin truncated at residue 270

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: H.49, A.129, N.130 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.130 Water bridges: A:N.130 GOL.2: 5 residues within 4Å: Chain A: D.150, N.188, T.189, N.192 Chain B: F.224 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.188 Water bridges: A:A.195 GOL.4: 3 residues within 4Å: Chain B: H.49, A.129, N.130 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.130 Water bridges: B:N.130 GOL.5: 5 residues within 4Å: Chain A: F.224 Chain B: D.150, N.188, T.189, N.192 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.188 Water bridges: B:A.195

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: D.198, I.199 Ligands: CL.6 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: D.198, I.199 Ligands: CL.3 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carrizo, M.E. et al., Structural and biochemical insight into glycogenin inactivation by the glycogenosis-causing T82M mutation. Febs Lett. (2012)

Release Date

2012-01-25

Peptides

Glycogenin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogenin-1

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