SMTL ID : 3v96.1

Complex of matrix metalloproteinase-10 catalytic domain (MMP-10cd) with tissue inhibitor of metalloproteinases-1 (TIMP-1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-oligomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: R.162, H.163 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.162, A:H.163 PO4.2: 5 residues within 4Å: Chain A: S.100, F.101, V.102, E.156, K.157 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.102, A:V.102 Water bridges: A:S.100 Salt bridges: A:K.157

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.1 Chain B: H.119, H.123, H.129 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Metal complexes: B:H.119, B:H.123, B:H.129, A:C.1 ZN.4: 4 residues within 4Å: Chain B: H.69, D.71, H.84, H.97 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.69, B:D.71, B:D.71, B:H.84, B:H.97

3 x CA: CALCIUM ION(Non-covalent)

CA.5: 6 residues within 4Å: Chain B: D.76, G.77, G.79, S.81, D.99, E.102 6 PLIP interactions: 6 interactions with chain B Metal complexes: B:D.76, B:G.77, B:G.79, B:S.81, B:D.99, B:E.102 CA.6: 6 residues within 4Å: Chain B: A.58, D.59, G.91, L.92, Y.93, D.95 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.59, B:G.91, B:Y.93, B:D.95, H2O.152 CA.7: 3 residues within 4Å: Chain B: D.25, D.100, E.102 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.25, B:D.100, B:D.100, B:E.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Batra, J. et al., Matrix metalloproteinase-10 (MMP-10) interaction with tissue inhibitors of metalloproteinases TIMP-1 and TIMP-2: binding studies and crystal structure. J.Biol.Chem. (2012)

Release Date

2012-03-28

Peptides

Metalloproteinase inhibitor 1: A
Stromelysin-2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Metalloproteinase inhibitor 1

Stromelysin-2

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