SMTL ID : 3vbq.1

Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x 0F5: (5~{Z})-5-[[3-[6-[(4-azanylcyclohexyl)amino]pyrazin-2-yl]phenyl]methylidene]-1,3-thiazolidine-2,4-dione(Non-covalent)

0F5.1: 16 residues within 4Å: Chain A: L.17, G.18, F.22, V.25, A.38, K.40, I.77, L.93, E.94, R.95, D.101, E.144, N.145, L.147, I.158, D.159 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.22, A:F.22, A:A.38, A:I.77, A:L.93, A:R.95, A:L.147, A:I.158, A:I.158 Hydrogen bonds: A:D.159, A:D.159 Water bridges: A:K.40, A:F.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Good, A.C. et al., Implications of promiscuous Pim-1 kinase fragment inhibitor hydrophobic interactions for fragment-based drug design. J.Med.Chem. (2012)

Release Date

2012-03-21

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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