SMTL ID : 3vc3.1 (2 other biounits)

Crystal structure of beta-cyanoalanine synthase K95A mutant in soybean

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

homo-dimer

Ligands

2 x C6P: N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE(Non-covalent)

C6P.1: 22 residues within 4Å: Chain A: T.94, S.95, G.96, N.97, M.98, Q.167, M.198, G.199, I.200, G.201, S.202, G.203, G.204, T.205, T.244, G.245, N.246, V.248, S.289, P.316, S.317, Y.322 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:T.94, A:S.95, A:S.95, A:G.96, A:N.97, A:N.97, A:M.98, A:Q.167, A:Q.167, A:G.201, A:S.202, A:S.202, A:S.202, A:G.203, A:G.204, A:T.205, A:T.205, A:S.289 Water bridges: A:R.125, A:N.173, A:N.173, A:S.202, A:V.206, A:N.246 C6P.2: 22 residues within 4Å: Chain B: T.94, S.95, G.96, N.97, M.98, Q.167, M.198, G.199, I.200, G.201, S.202, G.203, G.204, T.205, T.244, G.245, N.246, V.248, S.289, P.316, S.317, Y.322 22 PLIP interactions: 22 interactions with chain B Hydrogen bonds: B:S.95, B:G.96, B:N.97, B:N.97, B:M.98, B:Q.167, B:G.201, B:S.202, B:S.202, B:S.202, B:G.203, B:G.204, B:T.205, B:T.205, B:S.289 Water bridges: B:S.95, B:R.125, B:N.173, B:N.173, B:S.202, B:V.206, B:N.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yi, H. et al., Structure of Soybean beta-Cyanoalanine Synthase and the Molecular Basis for Cyanide Detoxification in Plants. Plant Cell (2012)

Release Date

2012-09-12

Peptides

beta-cyanoalnine synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

beta-cyanoalnine synthase

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