SMTL ID : 3vgk.2 (1 other biounit)

Crystal structure of a ROK family glucokinase from Streptomyces griseus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.157, C.167, C.169, C.174 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.157, A:C.167, A:C.169, A:C.174 ZN.3: 4 residues within 4Å: Chain B: H.157, C.167, C.169, C.174 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.157, B:C.167, B:C.169, B:C.174 ZN.4: 4 residues within 4Å: Chain C: H.157, C.167, C.169, C.174 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.157, C:C.167, C:C.169, C:C.174 ZN.6: 4 residues within 4Å: Chain D: H.157, C.167, C.169, C.174 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.157, D:C.167, D:C.169, D:C.174

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: A.65, G.66, Y.67, N.104, D.105, E.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.104, A:D.105, A:E.154 SO4.5: 5 residues within 4Å: Chain C: Y.67, P.79, N.104, E.154, E.176 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.104, C:E.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyazono, K. et al., Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus. J.Bacteriol. (2012)

Release Date

2011-12-07

Peptides

Glucokinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
E

D
H

Glucokinase

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