SMTL ID : 3vh1.1

Crystal structure of Saccharomyces cerevisiae Atg7 (1-595)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.488, F.490, C.491, C.572, C.575 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.488, A:C.491, A:C.572, A:C.575 ZN.2: 2 residues within 4Å: Chain A: D.196, C.198 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.196, A:C.198 ZN.3: 5 residues within 4Å: Chain B: C.488, F.490, C.491, C.572, C.575 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.488, B:C.491, B:C.572, B:C.575 ZN.4: 2 residues within 4Å: Chain B: D.196, C.198 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.196, B:C.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noda, N.N. et al., Structural basis of Atg8 activation by a homodimeric E1, Atg7. Mol.Cell (2011)

Release Date

2011-09-21

Peptides

Ubiquitin-like modifier-activating enzyme ATG7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ubiquitin-like modifier-activating enzyme ATG7