SMTL ID : 3vid.1

Crystal structure of human VEGFR2 kinase domain with Compound A.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 4TT: 4,5,6,11-tetrahydro-1H-pyrazolo[4',3':6,7]cyclohepta[1,2-b]indole(Non-covalent)

4TT.1: 9 residues within 4Å: Chain A: L.28, V.36, A.54, E.105, F.106, C.107, K.108, G.110, L.223 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.28, A:V.36, A:L.223 Hydrogen bonds: A:C.107, A:C.107, A:C.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iwata, H. et al., A Back-to-Front Fragment-Based Drug Design Search Strategy Targeting the DFG-Out Pocket of Protein Tyrosine Kinases. ACS MED.CHEM.LETT. (2012)

Release Date

2012-08-15

Peptides

Vascular endothelial growth factor receptor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vascular endothelial growth factor receptor 2