SMTL ID : 3vk3.2 (1 other biounit)

Crystal Structure of L-Methionine gamma-Lyase from Pseudomonas putida C116H Mutant Complexed with L-methionine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x MET: METHIONINE(Non-covalent)

MET.1: 11 residues within 4Å: Chain A: Y.114, H.116, K.211, V.339, S.340, L.341, Q.349, T.355, R.375 Chain B: F.50, Y.59 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.114 Hydrogen bonds: A:S.340, A:Q.349, B:Y.59 Salt bridges: A:R.375 MET.2: 10 residues within 4Å: Chain B: Y.114, G.115, H.116, K.211, V.339, S.340, L.341, Q.349, T.355, R.375 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Ligand interactions Hydrophobic interactions: B:Y.114 Hydrogen bonds: B:Y.114, B:S.340, M.2, M.2 Salt bridges: B:R.375

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukumoto, M. et al., The role of amino acid residues in the active site of L-methionine gamma-lyase from Pseudomonas putida. Biosci.Biotechnol.Biochem. (2012)

Release Date

2012-09-19

Peptides

Methionine gamma-lyase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Methionine gamma-lyase

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