SMTL ID : 3vk6.1

Crystal structure of a phosphotyrosine binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.67, H.80, H.85 Chain B: C.61 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Metal complexes: A:C.67, A:H.80, A:H.85, B:C.61 ZN.2: 4 residues within 4Å: Chain A: C.4, C.7, C.25, C.28 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:C.7, A:C.25, A:C.28 ZN.3: 4 residues within 4Å: Chain A: C.20, H.22, C.40, C.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.20, A:H.22, A:C.40, A:C.43 ZN.4: 4 residues within 4Å: Chain A: C.61 Chain B: C.67, H.80, H.85 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Metal complexes: B:C.67, B:H.80, B:H.85, A:C.61 ZN.5: 4 residues within 4Å: Chain B: C.4, C.7, C.25, C.28 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.4, B:C.7, B:C.25, B:C.28 ZN.6: 4 residues within 4Å: Chain B: C.20, H.22, C.40, C.43 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.20, B:H.22, B:C.40, B:C.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mukherjee, M. et al., Structure of a novel phosphotyrosine-binding domain in Hakai that targets E-cadherin. Embo J. (2012)

Release Date

2012-01-25

Peptides

E3 ubiquitin-protein ligase Hakai: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

E3 ubiquitin-protein ligase Hakai