SMTL ID : 3vqj.1

Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.44, D.46, H.97, C.100, G.101 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:C.44, A:H.97, A:C.100, H2O.1, H2O.1 ZN.3: 5 residues within 4Å: Chain B: C.44, D.46, H.97, C.100, G.101 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:C.44, B:H.97, B:C.100, H2O.10, H2O.10 ZN.5: 5 residues within 4Å: Chain C: C.44, D.46, H.97, C.100, G.101 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:C.44, C:H.97, C:C.100, H2O.20, H2O.20 ZN.7: 5 residues within 4Å: Chain D: C.44, D.46, H.97, C.100, G.101 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:C.44, D:H.97, D:C.100, H2O.30, H2O.30

4 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain A: D.50, E.52 Chain D: D.50, E.52 Ligands: NA.8 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:E.52 Water bridges: A:V.51, D:V.51 NA.4: 5 residues within 4Å: Chain B: D.50, E.52 Chain C: D.50, E.52 Ligands: NA.6 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:D.50 Water bridges: C:V.51, B:V.51 NA.6: 5 residues within 4Å: Chain B: D.50, E.52 Chain C: D.50, E.52 Ligands: NA.4 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:D.50 Water bridges: B:V.51, C:V.51 NA.8: 5 residues within 4Å: Chain A: D.50, E.52 Chain D: D.50, E.52 Ligands: NA.2 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:E.52 Water bridges: A:V.51, D:V.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ogawa, T. et al., Carbonyl Sulfide Hydrolase from Thiobacillus thioparus Strain THI115 Is One of the beta-Carbonic Anhydrase Family Enzymes. J.Am.Chem.Soc. (2013)

Release Date

2013-02-27

Peptides

Carbonyl sulfide hydrolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Carbonyl sulfide hydrolase

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