SMTL ID : 3vqt.6 (5 other biounits)

Crystal structure analysis of the translation factor RF3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 15 residues within 4Å: Chain A: P.40, D.41, A.42, G.43, K.44, T.45, T.46, H.110, N.160, K.161, D.163, R.164, S.275, A.276, I.277 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:H.39, A:D.41, A:D.41, A:A.42, A:G.43, A:K.44, A:T.45, A:T.45, A:T.45, A:T.46, A:T.46, A:N.160, A:K.161, A:K.161, A:R.164, A:S.275, A:A.276, A:I.277 Water bridges: A:T.45, A:H.110 Salt bridges: A:H.110, A:D.163 GDP.2: 15 residues within 4Å: Chain B: P.40, D.41, A.42, G.43, K.44, T.45, T.46, H.110, N.160, K.161, D.163, R.164, S.275, A.276, I.277 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:D.41, B:A.42, B:G.43, B:K.44, B:T.45, B:T.45, B:T.46, B:T.46, B:N.160, B:K.161, B:K.161, B:R.164, B:S.275, B:A.276, B:I.277 Water bridges: B:H.39, B:T.45, B:T.46, B:H.110 Salt bridges: B:H.110, B:D.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kihira, K. et al., Crystal structure analysis of the translation factor RF3 (release factor 3). Febs Lett. (2012)

Release Date

2012-09-05

Peptides

Peptide chain release factor 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Peptide chain release factor 3

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