SMTL ID : 3vqu.2 (1 other biounit)

CRYSTAL STRUCTURE OF HUMAN MPS1 CATALYTIC DOMAIN IN COMPLEX WITH 4-[(4-amino-5-cyano-6-ethoxypyridin-2- yl)amino]benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

16 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Chain A: D.142 Ligand excluded by PLIP IOD.2: 4 residues within 4Å: Chain A: N.154, Q.155 Chain B: I.223, N.224 Ligand excluded by PLIP IOD.3: 3 residues within 4Å: Chain A: P.198, K.199, I.267 Ligand excluded by PLIP IOD.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.5: 3 residues within 4Å: Chain A: K.258, R.259, D.260 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: D.243, I.244, P.245 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: G.90, V.141 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain A: S.21, Y.39 Ligand excluded by PLIP IOD.10: 1 residues within 4Å: Chain B: D.142 Ligand excluded by PLIP IOD.11: 4 residues within 4Å: Chain A: I.223, N.224 Chain B: N.154, Q.155 Ligand excluded by PLIP IOD.12: 3 residues within 4Å: Chain B: P.198, K.199, I.267 Ligand excluded by PLIP IOD.13: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.14: 3 residues within 4Å: Chain B: K.258, R.259, D.260 Ligand excluded by PLIP IOD.15: 3 residues within 4Å: Chain B: D.243, I.244, P.245 Ligand excluded by PLIP IOD.16: 2 residues within 4Å: Chain B: G.90, V.141 Ligand excluded by PLIP IOD.17: 2 residues within 4Å: Chain B: S.21, Y.39 Ligand excluded by PLIP

2 x O22: 4-[(4-amino-5-cyano-6-ethoxypyridin-2-yl)amino]benzamide(Non-covalent)

O22.9: 14 residues within 4Å: Chain A: I.16, V.24, A.36, M.87, E.88, C.89, N.91, I.92, D.93, S.96, L.139, I.148, Q.157, P.158 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.24, A:A.36, A:L.139, A:I.148, A:P.158 Hydrogen bonds: A:E.88, A:C.89, A:D.93, A:D.93, A:S.96 O22.18: 14 residues within 4Å: Chain B: I.16, V.24, A.36, M.87, E.88, C.89, N.91, I.92, D.93, S.96, L.139, I.148, Q.157, P.158 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:V.24, B:A.36, B:L.139, B:I.148, B:P.158 Hydrogen bonds: B:E.88, B:C.89, B:D.93, B:D.93, B:S.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kusakabe, K. et al., Diaminopyridine-based potent and selective mps1 kinase inhibitors binding to an unusual flipped-Peptide conformation. Acs Med.Chem.Lett. (2012)

Release Date

2012-06-27

Peptides

Dual specificity protein kinase TTK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Dual specificity protein kinase TTK

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