SMTL ID : 3vs0.2 (1 other biounit)

Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor N-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.93 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: E.447, Y.450 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.8, R.46, R.51 Ligand excluded by PLIP

1 x VS0: N-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]benzamide(Non-covalent)

VS0.3: 16 residues within 4Å: Chain A: L.196, G.197, V.204, A.216, K.218, L.248, T.261, E.262, F.263, M.264, S.268, L.316, A.326, D.327, F.328, L.330 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.196, A:L.248, A:T.261, A:L.316, A:A.326, A:D.327, A:L.330, A:L.330 Hydrogen bonds: A:T.261, A:E.262, A:M.264 Water bridges: A:G.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saito, Y. et al., A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo. Sci Transl Med (2013)

Release Date

2013-05-01

Peptides

Tyrosine-protein kinase HCK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein kinase HCK

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