SMTL ID : 3vu5.1

Short peptide HIV entry Inhibitor SC22EK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-3-3-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: L.29, R.33, K.36 Ligands: NH4.2 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.33, A:K.36 SO4.3: 4 residues within 4Å: Chain C: L.29, R.33, K.36 Ligands: NH4.4 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:R.33, C:K.36 SO4.5: 4 residues within 4Å: Chain E: L.29, R.33, K.36 Ligands: NH4.6 2 PLIP interactions: 2 interactions with chain E Salt bridges: E:R.33, E:K.36

3 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.2: 3 residues within 4Å: Chain A: L.29, R.33 Ligands: SO4.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.33 NH4.4: 3 residues within 4Å: Chain C: L.29, R.33 Ligands: SO4.3 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.33 NH4.6: 3 residues within 4Å: Chain E: L.29, R.33 Ligands: SO4.5 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:R.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chong, H.H. et al., Short-peptide fusion inhibitors with high potency against wild-type and enfuvirtide-resistant HIV-1. Faseb J. (2013)

Release Date

2012-12-19

Peptides

Transmembrane protein gp41: ACE
SC22: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

Transmembrane protein gp41

SC22

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