SMTL ID : 3vu8.1

Metionyl-tRNA synthetase from Thermus thermophilus complexed with methionyl-adenylate analogue

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.127, C.130, C.144, H.147 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.127, A:C.130, A:C.144, A:H.147

1 x MDS: N-[METHIONYL]-N'-[ADENOSYL]-DIAMINOSULFONE(Non-covalent)

MDS.2: 11 residues within 4Å: Chain A: P.10, I.11, D.50, V.226, W.227, A.230, N.233, Y.234, I.261, P.264, H.265 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Konno, M. et al., The modeling of structures of specific conformation of homosysteine-AMP leading to thiolactone-formation on class Ia aminoacyl-tRNA synthetases. To be Published

Release Date

2013-06-26

Peptides

Methionine--tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine--tRNA ligase