SMTL ID : 3vv0.1

Crystal structure of histone methyltransferase SET7/9 in complex with DAAM-3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x KH3: 5'-{[(3S)-3-amino-3-carboxypropyl][2-(hexylamino)ethyl]amino}-5'-deoxyadenosine(Non-covalent)

KH3.1: 19 residues within 4Å: Chain A: I.120, S.122, A.123, G.124, E.125, Y.142, G.161, N.162, T.163, L.164, H.190, K.191, A.192, N.193, H.194, Y.202, Y.232, W.249, E.253 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.142, A:L.164, A:Y.202, A:Y.232, A:Y.232 Hydrogen bonds: A:E.125, A:Y.142, A:N.162, A:N.193, A:N.193, A:H.194, A:E.253 Water bridges: A:N.179, A:H.190, A:Y.202 Salt bridges: A:K.191 pi-Stacking: A:W.249, A:W.249, A:W.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Niwa, H. et al., Structures of histone methyltransferase SET7/9 in complexes with adenosylmethionine derivatives. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-03-27

Peptides

Histone-lysine N-methyltransferase SETD7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase SETD7

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