SMTL ID : 3vyg.1

Crystal structure of Thiocyanate hydrolase mutant R136W

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-4-4-4-mer

Ligands

4 x 3CO: COBALT (III) ION(Non-covalent)

3CO.1: 4 residues within 4Å: Chain C: C.128, C.131, S.132, C.133 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:C.128 3CO.3: 4 residues within 4Å: Chain F: C.128, C.131, S.132, C.133 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:C.128 3CO.5: 4 residues within 4Å: Chain I: C.128, C.131, S.132, C.133 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:C.128 3CO.7: 4 residues within 4Å: Chain L: C.128, C.131, S.132, C.133 1 PLIP interactions: 1 interactions with chain L Metal complexes: L:C.128

4 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.2: 2 residues within 4Å: Chain A: V.68 Chain C: R.177 6 PLIP interactions: 6 interactions with chain C Water bridges: C:Q.175, C:R.177, C:R.177, C:R.177, C:R.177 Salt bridges: C:R.177 TLA.4: 2 residues within 4Å: Chain D: V.68 Chain F: R.177 6 PLIP interactions: 6 interactions with chain F Water bridges: F:Q.175, F:R.177, F:R.177, F:R.177, F:R.177 Salt bridges: F:R.177 TLA.6: 2 residues within 4Å: Chain G: V.68 Chain I: R.177 6 PLIP interactions: 6 interactions with chain I Water bridges: I:Q.175, I:R.177, I:R.177, I:R.177, I:R.177 Salt bridges: I:R.177 TLA.8: 2 residues within 4Å: Chain J: V.68 Chain L: R.177 4 PLIP interactions: 4 interactions with chain L Water bridges: L:Q.175, L:R.177, L:R.177 Salt bridges: L:R.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamanaka, Y. et al., Effects of argnine residue around the substrate pocket on the substrate specificity of thiocyanate hydrolase. To be published

Release Date

2013-11-13

Peptides

Thiocyanate hydrolase subunit alpha: ADGJ
Thiocyanate hydrolase subunit beta: BEHK
Thiocyanate hydrolase subunit gamma: CFIL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

G
G

J
J

B
B

E
E

H
H

K
K

C
C

F
F

I
I

L
L

Thiocyanate hydrolase subunit alpha

Thiocyanate hydrolase subunit beta

Thiocyanate hydrolase subunit gamma

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