SMTL ID : 3vzu.1

Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with AMP-PNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-trimer

Ligands

3 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Covalent)

ANP.1: 8 residues within 4Å: Chain A: K.23, K.56, R.91, N.110, K.114, D.118, E.130, R.144 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:K.23, A:F.53, A:R.91, A:N.110, A:K.114, A:D.118, A:R.144, A:R.144 Salt bridges: A:K.23, A:K.114 ANP.2: 8 residues within 4Å: Chain B: K.23, K.56, R.91, N.110, K.114, D.118, E.130, R.144 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:K.23, B:F.53, B:R.91, B:N.110, B:K.114, B:D.118, B:R.144, B:R.144 Salt bridges: B:K.23, B:K.114 ANP.3: 8 residues within 4Å: Chain C: K.23, K.56, R.91, N.110, K.114, D.118, E.130, R.144 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:K.23, C:F.53, C:R.91, C:N.110, C:K.114, C:D.118, C:R.144, C:R.144 Salt bridges: C:K.23, C:K.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanabe, M. et al., Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2013-03-13

Peptides

outer membrane protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
X

C
X

Membrane

We predict this structure to be a membrane protein.
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outer membrane protein

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