SMTL ID : 3w06.1

Crystal structure of Arabidopsis thaliana DWARF14 Like (AtD14L)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

monomer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: Q.133, G.135, P.223 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.133, A:G.135 EDO.2: 6 residues within 4Å: Chain A: H.212, V.239, R.264, H.265, N.268, D.269 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.264 Water bridges: A:R.264 EDO.3: 3 residues within 4Å: Chain A: W.35, K.36, V.39 No protein-ligand interaction detected (PLIP) EDO.4: 2 residues within 4Å: Chain A: H.41, R.267 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.41, A:R.267, A:R.267 Water bridges: A:H.41 EDO.5: 4 residues within 4Å: Chain A: N.71, L.72, S.198, D.199 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.71, A:L.72, A:D.199, A:D.199 EDO.6: 2 residues within 4Å: Chain A: E.84, K.87 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.83, A:I.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kagiyama, M. et al., Structures of D14 and D14L in the strigolactone and karrikin signaling pathways. Genes Cells (2013)

Release Date

2013-01-23

Peptides

Hydrolase, alpha/beta fold family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hydrolase, alpha/beta fold family protein