SMTL ID : 3w2r.1

EGFR Kinase domain T790M/L858R mutant with compound 4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x W2R: 1-{3-[2-chloro-4-({5-[2-(2-hydroxyethoxy)ethyl]-5H-pyrrolo[3,2-d]pyrimidin-4-yl}amino)phenoxy]phenyl}-3-cyclohexylurea(Non-covalent)

W2R.1: 21 residues within 4Å: Chain A: L.27, F.32, V.35, A.52, K.54, L.56, M.75, C.84, L.97, M.99, Q.100, L.101, M.102, R.150, N.151, L.153, T.163, D.164, F.165, R.167, F.306 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.32, A:F.32, A:V.35, A:A.52, A:K.54, A:L.56, A:L.97, A:L.153, A:T.163, A:R.167, A:F.306 Hydrogen bonds: A:K.54, A:M.102, A:D.164, A:D.164, A:F.165 Water bridges: A:E.71, A:T.163, A:F.165 pi-Stacking: A:F.165 Halogen bonds: A:L.97

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: M.261, I.262, D.263 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.262, A:D.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sogabe, S. et al., Structure-Based Approach for the Discovery of Pyrrolo[3,2-d]pyrimidine-Based EGFR T790M/L858R Mutant Inhibitors. Acs Med.Chem.Lett. (2013)

Release Date

2013-01-16

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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