SMTL ID : 3w2v.1

Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to 3'-AMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.254, C.257, C.284, C.287 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.254, A:C.257, A:C.284, A:C.287

1 x 3AM: [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate(Non-covalent)

3AM.2: 11 residues within 4Å: Chain A: V.35, Q.36, I.39, S.52, L.55, S.56, N.106, K.107, Y.475, D.480 Chain B: K.111 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.36, A:S.52, A:N.106, A:D.480 Salt bridges: A:K.107, B:K.111 pi-Stacking: A:Y.475, A:Y.475

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osawa, T. et al., Crystal Structure of the Cmr2-Cmr3 Subcomplex in the CRISPR-Cas RNA Silencing Effector Complex. J.Mol.Biol. (2013)

Release Date

2013-10-16

Peptides

CRISPR system Cmr subunit Cmr2: A
CRISPR system Cmr subunit Cmr3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CRISPR system Cmr subunit Cmr2

CRISPR system Cmr subunit Cmr3

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