- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.1: 18 residues within 4Å:- Chain A: T.40, Y.43, F.44, F.47, H.59, K.62, A.66, L.84, L.87, H.88, L.92, V.94, N.98, F.99, L.102, V.133, L.137
- Ligands: CMO.2
19 PLIP interactions:18 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:Y.43, A:F.44, A:F.44, A:F.47, A:L.84, A:L.84, A:L.87, A:L.92, A:V.94, A:V.94, A:F.99, A:F.99, A:F.99, A:L.102, A:L.102, A:V.133, A:L.137
- Metal complexes: A:H.88, CMO.2
HEM.3: 17 residues within 4Å:- Chain B: T.38, F.41, F.42, H.63, K.66, V.67, A.70, F.71, L.88, H.92, L.96, V.98, N.102, F.103, L.106, L.141
- Ligands: CMO.4
25 PLIP interactions:24 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: B:T.38, B:F.41, B:F.41, B:F.41, B:F.42, B:F.42, B:F.42, B:V.67, B:L.88, B:L.88, B:L.96, B:V.98, B:V.98, B:N.102, B:F.103, B:L.106, B:L.141
- Water bridges: B:H.63, B:H.63, B:K.66, B:K.66
- Salt bridges: B:K.66
- pi-Stacking: B:H.63
- Metal complexes: B:H.92, CMO.4
HEM.5: 18 residues within 4Å:- Chain C: Y.43, F.44, F.47, H.59, K.62, V.63, A.66, L.84, L.87, H.88, L.92, V.94, N.98, F.99, L.102, V.133, L.137
- Ligands: CMO.6
20 PLIP interactions:19 interactions with chain C, 1 Ligand-Ligand interactions- Hydrophobic interactions: C:Y.43, C:F.44, C:F.44, C:F.47, C:K.62, C:V.63, C:A.66, C:L.84, C:L.84, C:L.92, C:V.94, C:F.99, C:F.99, C:L.102, C:L.102, C:V.133, C:L.137
- pi-Stacking: C:H.59
- Metal complexes: C:H.88, CMO.6
HEM.7: 17 residues within 4Å:- Chain D: T.38, F.41, F.42, H.63, K.66, V.67, A.70, F.71, L.88, H.92, L.96, V.98, N.102, F.103, L.106, L.141
- Ligands: CMO.8
24 PLIP interactions:23 interactions with chain D, 1 Ligand-Ligand interactions- Hydrophobic interactions: D:T.38, D:F.41, D:F.41, D:F.42, D:F.42, D:V.67, D:V.67, D:A.70, D:F.71, D:L.88, D:L.96, D:V.98, D:V.98, D:N.102, D:F.103, D:F.103, D:L.106, D:L.141
- Water bridges: D:S.44, D:H.63
- Salt bridges: D:K.66
- pi-Cation interactions: D:H.63
- Metal complexes: D:H.92, CMO.8
- 4 x CMO: CARBON MONOXIDE(Non-functional Binders)
CMO.2: 5 residues within 4Å:- Chain A: F.44, H.59, V.63, H.88
- Ligands: HEM.1
No protein-ligand interaction detected (PLIP)CMO.4: 5 residues within 4Å:- Chain B: F.42, H.63, V.67, H.92
- Ligands: HEM.3
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:H.63
CMO.6: 5 residues within 4Å:- Chain C: F.44, H.59, V.63, H.88
- Ligands: HEM.5
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:H.59
CMO.8: 4 residues within 4Å:- Chain D: H.63, V.67, H.92
- Ligands: HEM.7
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:H.63
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Safo, M.K. et al., Structure of fully liganded Hb zeta 2 beta 2(s) trapped in a tense conformation. Acta Crystallogr.,Sect.D (2013)
- Release Date
- 2013-02-06
- Peptides
- Hemoglobin subunit zeta: AC
Hemoglobin subunit beta: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 4 x CMO: CARBON MONOXIDE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Safo, M.K. et al., Structure of fully liganded Hb zeta 2 beta 2(s) trapped in a tense conformation. Acta Crystallogr.,Sect.D (2013)
- Release Date
- 2013-02-06
- Peptides
- Hemoglobin subunit zeta: AC
Hemoglobin subunit beta: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
CB
BD
D