SMTL ID : 3w4y.2 (1 other biounit)

Crystal structure of yeast Erv1 core

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 24 residues within 4Å: Chain A: V.18, E.19, G.22, R.23, S.25, W.26, H.30, Y.59, W.63, C.64, F.68, C.90, H.93, N.94, V.96, N.97, K.99, L.100, K.102, F.105, W.110, R.113, W.114 Chain B: Y.10 20 PLIP interactions: 19 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.26, A:W.26, A:W.26, A:Y.59, A:F.68 Hydrogen bonds: A:W.26, A:C.90, A:H.93, A:N.97, A:K.99, A:K.102, A:R.113 Salt bridges: A:R.23, A:H.93, A:K.102 pi-Stacking: A:H.93, A:H.93, A:F.105, A:F.105 Water bridges: B:Y.10 FAD.2: 24 residues within 4Å: Chain A: Y.10 Chain B: V.18, E.19, G.22, R.23, S.25, W.26, H.30, Y.59, W.63, C.64, F.68, C.90, H.93, N.94, V.96, N.97, K.99, L.100, K.102, F.105, W.110, R.113, W.114 20 PLIP interactions: 19 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.26, B:W.26, B:W.26, B:Y.59, B:F.68 Hydrogen bonds: B:W.26, B:C.90, B:H.93, B:N.97, B:K.99, B:K.102, B:R.113 Salt bridges: B:R.23, B:H.93, B:K.102 pi-Stacking: B:H.93, B:H.93, B:F.105, B:F.105 Water bridges: A:Y.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawano, S. et al., Crystal structure of yeast Erv1 core. To be published

Release Date

2013-03-20

Peptides

Mitochondrial FAD-linked sulfhydryl oxidase ERV1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Mitochondrial FAD-linked sulfhydryl oxidase ERV1

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