SMTL ID : 3w9c.1

Crystal structure of the electron transfer complex of cytochrome p450cam with putidaredoxin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: P.102, T.103, Q.110, R.114, L.246, L.247, G.250, G.251, T.254, V.255, F.258, L.296, D.299, R.301, Q.324, T.351, F.352, G.353, H.357, C.359, L.360, G.361, A.365, E.368 Ligands: GOL.5 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:V.255, A:F.258, A:L.296, A:Q.324, A:T.351, A:F.352, A:F.352 Hydrogen bonds: A:Q.110, A:D.299, A:Q.324 Salt bridges: A:R.114, A:R.301, A:H.357, A:H.357 Metal complexes: A:C.359

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: S.269, P.270, E.271, H.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.271, A:E.271, A:H.272 Salt bridges: A:H.272 SO4.3: 4 residues within 4Å: Chain A: A.336, P.337, M.338, H.339 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.338, A:H.339 Salt bridges: A:H.339 SO4.4: 3 residues within 4Å: Chain A: P.21, E.22, H.23 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.22, A:H.23 Salt bridges: A:H.23 SO4.7: 5 residues within 4Å: Chain B: T.77, A.78, E.79, D.105, R.106 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.79

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: T.103, G.250, T.254 Ligands: HEM.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.103, A:T.103, A:G.250, A:T.254

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.6: 11 residues within 4Å: Chain B: M.26, G.39, C.41, G.43, A.45, S.46, C.47, A.48, C.50, L.86, C.88 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.41, B:C.47, B:C.50, B:C.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hiruma, Y. et al., The structure of the cytochrome p450cam-putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography. J.Mol.Biol. (2013)

Release Date

2013-08-21

Peptides

Camphor 5-monooxygenase: A
Putidaredoxin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Camphor 5-monooxygenase

Putidaredoxin

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