SMTL ID : 3w9e.1

Structure of Human Monoclonal Antibody E317 Fab Complex with HSV-2 gD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 5 residues within 4Å: Chain A: I.65, Q.66, T.117, N.119, N.196 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.146, K.147 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, C.C. et al., Structural basis for the antibody neutralization of herpes simplex virus. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-10-02

Peptides

Envelope glycoprotein D: A
Antibody Fab heavy chain: B
Antibody Fab light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

C
B

Envelope glycoprotein D

Antibody Fab heavy chain

Antibody Fab light chain

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