SMTL ID : 3war.1

Crystal structure of human CK2a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.04 Å

Oligo State

monomer

Ligands

1 x NIO: NICOTINIC ACID(Non-covalent)

NIO.1: 7 residues within 4Å: Chain A: V.58, V.71, K.73, I.100, F.118, I.179, D.180 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.100, A:F.118, A:I.179, A:I.179, A:I.179 Hydrogen bonds: A:D.180 Water bridges: A:E.86, A:W.181 Salt bridges: A:K.73 pi-Stacking: A:F.118

19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: L.46, V.47, R.48, K.49, F.59 Ligand excluded by PLIP EDO.3: 7 residues within 4Å: Chain A: N.122, N.123, T.124, I.169, D.170, H.171, E.172 Ligand excluded by PLIP EDO.4: 8 residues within 4Å: Chain A: N.123, T.124, D.125, F.126, P.164, H.165, V.167, M.168 Ligand excluded by PLIP EDO.5: 5 residues within 4Å: Chain A: K.234, F.237, F.238, V.253, F.289 Ligand excluded by PLIP EDO.6: 7 residues within 4Å: Chain A: V.253, L.254, R.283, K.284, W.286, D.307 Ligands: EDO.20 Ligand excluded by PLIP EDO.7: 3 residues within 4Å: Chain A: T.22, H.188, P.189 Ligand excluded by PLIP EDO.8: 2 residues within 4Å: Chain A: R.13, P.189 Ligand excluded by PLIP EDO.9: 7 residues within 4Å: Chain A: Q.41, Y.44, V.72, V.106, D.108 Ligands: EDO.14, EDO.15 Ligand excluded by PLIP EDO.10: 5 residues within 4Å: Chain A: T.132, T.134, D.137, H.171, R.174 Ligand excluded by PLIP EDO.11: 6 residues within 4Å: Chain A: Y.136, D.137, F.140, Y.141, H.171, R.174 Ligand excluded by PLIP EDO.12: 4 residues within 4Å: Chain A: R.196, V.197, A.198, K.203 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain A: K.82, R.85, R.160, L.183, N.194, V.197 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain A: L.46, I.74, D.108, P.109, V.110 Ligands: EDO.9, EDO.15 Ligand excluded by PLIP EDO.15: 5 residues within 4Å: Chain A: Q.41, Y.44, Q.45 Ligands: EDO.9, EDO.14 Ligand excluded by PLIP EDO.16: 4 residues within 4Å: Chain A: D.135, Y.136, R.139, T.331 Ligand excluded by PLIP EDO.17: 4 residues within 4Å: Chain A: V.10, D.264, K.265, N.267 Ligand excluded by PLIP EDO.18: 7 residues within 4Å: Chain A: V.16, H.153, Y.216, S.217, M.220, T.319, A.320 Ligand excluded by PLIP EDO.19: 2 residues within 4Å: Chain A: R.285, E.287 Ligand excluded by PLIP EDO.20: 5 residues within 4Å: Chain A: R.285, W.286, E.287, L.303 Ligands: EDO.6 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kinoshita, T. et al., Crystal structure of human CK2 alpha at 1.06 angstrom resolution. J.SYNCHROTRON RADIAT. (2013)

Release Date

2013-10-30

Peptides

Casein kinase II subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase II subunit alpha

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