- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x BGC- BMA: beta-D-mannopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)
- 12 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.3: 7 residues within 4Å:- Chain A: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:N.192
- Water bridges: A:K.254, A:Y.284
- Salt bridges: A:R.191, A:R.209, A:K.254, A:H.273
PO4.4: 3 residues within 4Å:- Chain A: V.311, G.312, R.315
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain E- Hydrogen bonds: A:G.312
- Water bridges: A:P.310, A:R.315, E:R.346, E:R.346
- Salt bridges: A:R.315
PO4.5: 7 residues within 4Å:- Chain B: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.2
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:N.192, B:Y.284
- Water bridges: B:K.254
- Salt bridges: B:R.191, B:R.209, B:K.254, B:H.273
PO4.6: 3 residues within 4Å:- Chain B: V.311, G.312, R.315
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain D- Hydrogen bonds: B:G.312
- Salt bridges: B:R.315
- Water bridges: D:R.346, D:R.346, D:R.346, D:R.346
PO4.9: 7 residues within 4Å:- Chain C: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.7
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:N.192
- Water bridges: C:K.254, C:Y.284
- Salt bridges: C:R.191, C:R.209, C:K.254, C:H.273
PO4.10: 3 residues within 4Å:- Chain C: V.311, G.312, R.315
6 PLIP interactions:4 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:G.312
- Water bridges: C:P.310, C:R.315, A:R.346, A:R.346
- Salt bridges: C:R.315
PO4.11: 7 residues within 4Å:- Chain D: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.8
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:N.192, D:Y.284
- Water bridges: D:K.254
- Salt bridges: D:R.191, D:R.209, D:K.254, D:H.273
PO4.12: 3 residues within 4Å:- Chain D: V.311, G.312, R.315
6 PLIP interactions:2 interactions with chain D, 4 interactions with chain F- Hydrogen bonds: D:G.312
- Salt bridges: D:R.315
- Water bridges: F:R.346, F:R.346, F:R.346, F:R.346
PO4.15: 7 residues within 4Å:- Chain E: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.13
7 PLIP interactions:7 interactions with chain E- Hydrogen bonds: E:N.192
- Water bridges: E:K.254, E:Y.284
- Salt bridges: E:R.191, E:R.209, E:K.254, E:H.273
PO4.16: 3 residues within 4Å:- Chain E: V.311, G.312, R.315
6 PLIP interactions:4 interactions with chain E, 2 interactions with chain C- Hydrogen bonds: E:G.312
- Water bridges: E:P.310, E:R.315, C:R.346, C:R.346
- Salt bridges: E:R.315
PO4.17: 7 residues within 4Å:- Chain F: R.191, N.192, R.209, K.254, H.273, Y.284
- Ligands: BGC-BMA.14
7 PLIP interactions:7 interactions with chain F- Hydrogen bonds: F:N.192, F:Y.284
- Water bridges: F:K.254
- Salt bridges: F:R.191, F:R.209, F:K.254, F:H.273
PO4.18: 3 residues within 4Å:- Chain F: V.311, G.312, R.315
6 PLIP interactions:2 interactions with chain F, 4 interactions with chain B- Hydrogen bonds: F:G.312
- Salt bridges: F:R.315
- Water bridges: B:R.346, B:R.346, B:R.346, B:R.346
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakae, S. et al., Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP. J.Mol.Biol. (2013)
- Release Date
- 2013-09-04
- Peptides
- 4-O-beta-D-mannosyl-D-glucose phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x BGC- BMA: beta-D-mannopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)
- 12 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakae, S. et al., Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP. J.Mol.Biol. (2013)
- Release Date
- 2013-09-04
- Peptides
- 4-O-beta-D-mannosyl-D-glucose phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
B